oh i see what you mean...
yes . . . sort of.
If I've set the SS module to auto press the button on restart and im too quick putting in the Ghost code, then yes the Ghost can register the SS button press.
but what I've been doing (and its second nature now) is to switch the ignition on and glance over at the SS button/light to see what state i left it in before entering the Ghost code. . . .
the SS will either stay off or switch its-self back on . . . . so that slight pause/delay while i look at the button is enough time to then enter the Ghost code like normal and be on my way....
before i was just switching the SS back to OFF before shutting down the van . . . . . but the issue there was i kept forgetting to do that half the times . . . . .=]
So my slight pause before entering the Ghost code is fine, the benefit of the auto SS module out-ways any little niggles with code entry in my book.