I could have the wrong end of the stick completely here, but:-
You have to connect the solar panel before connecting the battery. If you connect the panel whilst the output of the MPPT is connected to the battery, the internal fuse blows. Have I interpreted this correctly?
If so, then having an isolator in the solar side would increase the chances of this happening. You want the solar permanently attached with the chances of it being disconnected/reconnected reduced to a minimum. If this situation arose in an industrial setting, there would be some kind of mechanical interlock which prevented the solar from being connected if the output from the MPPT was connected.
Like I said, I may have got this arse about face